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  5. Sacu_v1.1_s0011.g005328

Sacu_v1.1_s0011.g005328


Description : not classified & original description: CDS=181-1533


Gene families : OG0001257 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001257_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0011.g005328

Target Alias Description ECC score Gene Family Method Actions
AT2G40960 No alias Single-stranded nucleic acid binding R3H protein 0.01 OrthoFinder output from all 47 species
Adi_g127445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06097 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45992.t1 Aspi01Gene45992 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.21G044300.1 Ceric.21G044300 not classified & original description: pacid=50604062... 0.02 OrthoFinder output from all 47 species
Ehy_g13965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g43007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR001374 R3H_dom 85 135
IPR024771 SUZ 178 227
No external refs found!