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  5. Sacu_v1.1_s0011.g005159

Sacu_v1.1_s0011.g005159 (GFA2)


Aliases : GFA2

Description : co-chaperone *(Hsp40) & original description: CDS=131-1432


Gene families : OG0001086 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001086_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0011.g005159
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Adi_g019091 GFA2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082576 GFA2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10967 GFA2 co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11999 GFA2 co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g07612 GFA2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11087 GFA2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02969 GFA2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24757 GFA2 co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g04488 GFA2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0031072 heat shock protein binding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP HCCA
CC GO:0000445 THO complex part of transcription export complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 68 130
IPR002939 DnaJ_C 185 399
IPR001305 HSP_DnaJ_Cys-rich_dom 212 273
No external refs found!