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  5. Sacu_v1.1_s0010.g004614

Sacu_v1.1_s0010.g004614


Description : not classified & original description: CDS=1-1374


Gene families : OG0002654 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002654_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0010.g004614
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Aob_g03101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18542 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene72729.t1 Aspi01Gene72729 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g22459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g28912 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g17106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0228.g026388 No alias not classified & original description: CDS=1-1512 0.07 OrthoFinder output from all 47 species
Zm00001e035465_P001 Zm00001e035465 Probable mitochondrial saccharopine dehydrogenase-like... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005097 Sacchrp_dh_NADP 15 146
No external refs found!