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Description : not classified & original description: CDS=1-1875
Gene families : OG0006545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006545_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sacu_v1.1_s0008.g004055 | |
| Cluster | HCCA: Cluster_54 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00261700 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g73710... | 0.05 | OrthoFinder output from all 47 species | |
| AT3G23020 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.27G000500.1 | Ceric.27G000500 | not classified & original description: pacid=50606226... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g09918 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Gb_11434 | No alias | Pentatricopeptide repeat-containing protein At1g73710... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g06710.1 | LOC_Os03g06710 | Pentatricopeptide repeat-containing protein At3g23020... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g28900.1 | LOC_Os07g28900 | Pentatricopeptide repeat-containing protein At1g73710... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g13366 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g15290 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo77736 | No alias | Pentatricopeptide repeat-containing protein At3g23020... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g09786 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000079 | regulation of cyclin-dependent protein serine/threonine kinase activity | IEP | HCCA |
| BP | GO:0000154 | rRNA modification | IEP | HCCA |
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| BP | GO:0001510 | RNA methylation | IEP | HCCA |
| BP | GO:0001932 | regulation of protein phosphorylation | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008649 | rRNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019220 | regulation of phosphate metabolic process | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| MF | GO:0019900 | kinase binding | IEP | HCCA |
| MF | GO:0019901 | protein kinase binding | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| BP | GO:0031167 | rRNA methylation | IEP | HCCA |
| BP | GO:0031399 | regulation of protein modification process | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0042325 | regulation of phosphorylation | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| BP | GO:0043549 | regulation of kinase activity | IEP | HCCA |
| MF | GO:0044183 | protein folding chaperone | IEP | HCCA |
| BP | GO:0045859 | regulation of protein kinase activity | IEP | HCCA |
| BP | GO:0050790 | regulation of catalytic activity | IEP | HCCA |
| BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | HCCA |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0051338 | regulation of transferase activity | IEP | HCCA |
| BP | GO:0051726 | regulation of cell cycle | IEP | HCCA |
| BP | GO:0065009 | regulation of molecular function | IEP | HCCA |
| MF | GO:0070037 | rRNA (pseudouridine) methyltransferase activity | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| BP | GO:0070475 | rRNA base methylation | IEP | HCCA |
| BP | GO:0071900 | regulation of protein serine/threonine kinase activity | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1904029 | regulation of cyclin-dependent protein kinase activity | IEP | HCCA |
| No external refs found! |