1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0008.g003947

Sacu_v1.1_s0008.g003947 (AT-RSH2, ATRSH2, RSH2)


Aliases : AT-RSH2, ATRSH2, RSH2

Description : bifunctional ppGpp synthetase and hydrolase *(RSH) & original description: CDS=1005-3170


Gene families : OG0001778 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001778_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0008.g003947

Target Alias Description ECC score Gene Family Method Actions
Aev_g04851 AT-RSH2, ATRSH2, RSH2 bifunctional ppGpp synthetase and hydrolase *(RSH) &... 0.02 OrthoFinder output from all 47 species
Als_g04435 AT-RSH2, ATRSH2, RSH2 bifunctional ppGpp synthetase and hydrolase *(RSH) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene40198.t1 AT-RSH2, ATRSH2,... bifunctional ppGpp synthetase and hydrolase *(RSH) &... 0.03 OrthoFinder output from all 47 species
Ore_g10249 AT-RSH2, ATRSH2, RSH2 bifunctional ppGpp synthetase and hydrolase *(RSH) &... 0.03 OrthoFinder output from all 47 species
Sam_g24759 No alias bifunctional ppGpp synthetase and hydrolase *(RSH) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015969 guanosine tetraphosphate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR007685 RelA_SpoT 439 548
No external refs found!