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  5. Sacu_v1.1_s0007.g003471

Sacu_v1.1_s0007.g003471


Description : not classified & original description: CDS=1-1887


Gene families : OG0002421 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002421_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0007.g003471
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AT1G61900 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Adi_g019688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113246 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05954 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02195 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.35G040100.1 Ceric.35G040100 not classified & original description: pacid=50580886... 0.05 OrthoFinder output from all 47 species
Dac_g08168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15943 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os10g38980.1 LOC_Os10g38980 Uncharacterized GPI-anchored protein At1g61900... 0.02 OrthoFinder output from all 47 species
Len_g04670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14506 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g35562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c19_7530V3.1 Pp3c19_7530 No annotation 0.01 OrthoFinder output from all 47 species
Solyc08g013880.4.1 Solyc08g013880 Uncharacterized GPI-anchored protein At1g61900... 0.03 OrthoFinder output from all 47 species
Spa_g56304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14582 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e032642_P001 Zm00001e032642 Uncharacterized GPI-anchored protein At1g61900... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR043891 SPARK 258 423
No external refs found!