Sacu_v1.1_s0006.g003378


Description : not classified & original description: CDS=1-624


Gene families : OG0000313 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000313_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0006.g003378

Target Alias Description ECC score Gene Family Method Actions
Aev_g47863 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g29340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g21107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29314.t1 Aspi01Gene29314 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene37077.t1 Aspi01Gene37077 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene47707.t1 Aspi01Gene47707 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene59303.t1 Aspi01Gene59303 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59307.t1 Aspi01Gene59307 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene69469.t1 Aspi01Gene69469 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69470.t1 Aspi01Gene69470 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07849 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38659 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g54307 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g40284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_35605 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g11585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56139 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003347 No alias not classified & original description: CDS=1-1002 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003353 No alias not classified & original description: CDS=1-708 0.05 OrthoFinder output from all 47 species
Sam_g02458 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g13099 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g17313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g04501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g19230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45198 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003437_P001 Zm00001e003437 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!