1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0006.g003366

Sacu_v1.1_s0006.g003366


Description : not classified & original description: CDS=1-747


Gene families : OG0003299 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003299_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0006.g003366
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00150970 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Aspi01Gene71793.t1 Aspi01Gene71793 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g32623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP HCCA
MF GO:0004000 adenosine deaminase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005758 mitochondrial intermembrane space IEP HCCA
BP GO:0006382 adenosine to inosine editing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016530 metallochaperone activity IEP HCCA
MF GO:0016531 copper chaperone activity IEP HCCA
BP GO:0016553 base conversion or substitution editing IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0031970 organelle envelope lumen IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!