Sacu_v1.1_s0006.g003353


Description : not classified & original description: CDS=1-708


Gene families : OG0000313 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000313_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0006.g003353

Target Alias Description ECC score Gene Family Method Actions
Aev_g02018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g47863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g12643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21403 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g29340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03829 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g34033 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13624.t1 Aspi01Gene13624 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene37077.t1 Aspi01Gene37077 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47707.t1 Aspi01Gene47707 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene49677.t1 Aspi01Gene49677 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49688.t1 Aspi01Gene49688 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49691.t1 Aspi01Gene49691 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63636.t1 Aspi01Gene63636 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03087 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.24G077500.1 Ceric.24G077500 not classified & original description: pacid=50628753... 0.05 OrthoFinder output from all 47 species
Ceric.34G050200.1 Ceric.34G050200 not classified & original description: pacid=50623593... 0.04 OrthoFinder output from all 47 species
Ceric.34G050300.1 Ceric.34G050300 not classified & original description: pacid=50623836... 0.07 OrthoFinder output from all 47 species
Ceric.34G050400.1 Ceric.34G050400 not classified & original description: pacid=50623439... 0.06 OrthoFinder output from all 47 species
Ceric.34G050600.1 Ceric.34G050600 not classified & original description: pacid=50623485... 0.04 OrthoFinder output from all 47 species
Ceric.34G051000.1 Ceric.34G051000 not classified & original description: pacid=50623046... 0.04 OrthoFinder output from all 47 species
Ceric.34G051200.1 Ceric.34G051200 not classified & original description: pacid=50623802... 0.06 OrthoFinder output from all 47 species
Dac_g20467 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g40285 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g03472 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g06751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28830 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11537 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g16871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_35602 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_35605 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g38760.1 LOC_Os08g38760 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g11661 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31557 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g43256 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56139 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003347 No alias not classified & original description: CDS=1-1002 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003362 No alias not classified & original description: CDS=1-648 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003378 No alias not classified & original description: CDS=1-624 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0215.g026035 No alias not classified & original description: CDS=1-822 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s3244.g028679 No alias not classified & original description: CDS=1-510 0.07 OrthoFinder output from all 47 species
Sam_g05096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g066040.1.1 Solyc07g066040 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g03874 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g04501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52684 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e003437_P001 Zm00001e003437 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e011930_P001 Zm00001e011930 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004664 prephenate dehydratase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!