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  5. Sacu_v1.1_s0006.g003007

Sacu_v1.1_s0006.g003007


Description : autophagosome cargo receptor protein *(NBR1) & original description: CDS=1-2124


Gene families : OG0000431 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000431_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0006.g003007

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00211440 evm_27.TU.AmTr_v1... Vesicle trafficking.autophagosome formation.cargo... 0.04 OrthoFinder output from all 47 species
Aob_g03466 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Aob_g17044 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.05 OrthoFinder output from all 47 species
Aob_g39769 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g08201 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g08495 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g15865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007647001 No alias Vesicle trafficking.autophagosome formation.cargo... 0.02 OrthoFinder output from all 47 species
Len_g13762 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Len_g37978 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g10374 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Pir_g22788 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Pir_g32383 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g17555 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e014993_P002 Zm00001e014993 NBR1 autophagosome autophagic adapter protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008569 minus-end-directed microtubule motor activity IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR000433 Znf_ZZ 233 273
IPR032350 N_BRCA1_central 362 463
No external refs found!