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  5. Sacu_v1.1_s0006.g002979

Sacu_v1.1_s0006.g002979


Description : not classified & original description: CDS=1-3354


Gene families : OG0010327 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010327_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0006.g002979
Cluster HCCA: Cluster_59


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009583 detection of light stimulus IEP HCCA
BP GO:0009584 detection of visible light IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0051606 detection of stimulus IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 644 668
IPR002885 Pentatricopeptide_repeat 977 1024
IPR002885 Pentatricopeptide_repeat 669 716
IPR002885 Pentatricopeptide_repeat 771 818
IPR002885 Pentatricopeptide_repeat 875 921
No external refs found!