1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0006.g002947

Sacu_v1.1_s0006.g002947


Description : regulatory protein *(CORD) of cortical microtubule organisation & original description: CDS=1-2475


Gene families : OG0001085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001085_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0006.g002947

Target Alias Description ECC score Gene Family Method Actions
LOC_Os09g34110.1 LOC_Os09g34110 regulatory protein (CORD) of cortical microtubule organisation 0.01 OrthoFinder output from all 47 species
Nbi_g03180 No alias regulatory protein *(CORD) of cortical microtubule... 0.03 OrthoFinder output from all 47 species
Pir_g18291 No alias regulatory protein *(CORD) of cortical microtubule... 0.03 OrthoFinder output from all 47 species
Tin_g14648 No alias regulatory protein *(CORD) of cortical microtubule... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR010341 DUF936_pln 4 820
No external refs found!