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  5. Sacu_v1.1_s0004.g002304

Sacu_v1.1_s0004.g002304 (RCD3, CDI3, SLAC1, OZS1)


Aliases : RCD3, CDI3, SLAC1, OZS1

Description : anion channel *(SLAC) & original description: CDS=5-2347


Gene families : OG0000650 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000650_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0004.g002304
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Aob_g34210 SLAH3 anion channel *(SLAC) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g43460.2 SLAH3, LOC_Os01g43460 anion channel (SLAC) 0.03 OrthoFinder output from all 47 species
Msp_g14267 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g24130 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e020426_P001 SLAH3, Zm00001e020426 anion channel (SLAC) 0.02 OrthoFinder output from all 47 species
Zm00001e027903_P001 SLAH2, Zm00001e027903 anion channel (SLAC) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR004695 SLAC1/Mae1/Ssu1/TehA 376 621
No external refs found!