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Aliases : PSBB
Description : not classified & original description: CDS=1-408
Gene families : OG0004191 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004191_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sacu_v1.1_s0004.g002254 | |
| Cluster | HCCA: Cluster_31 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00585p00000100 | PSBB,... | Photosynthesis.photophosphorylation.photosystem II.PS-II... | 0.07 | OrthoFinder output from all 47 species | |
| ATCG00680 | PSBB | photosystem II reaction center protein B | 0.18 | OrthoFinder output from all 47 species | |
| Aev_g08305 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.12 | OrthoFinder output from all 47 species | |
| Als_g00826 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g02288 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.07 | OrthoFinder output from all 47 species | |
| Cba_g02603 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.02G013400.1 | PSBB, Ceric.02G013400 | component *(PsbB/CP47) of PS-II reaction center complex... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.02G015500.1 | PSBB, Ceric.02G015500 | component *(PsbB/CP47) of PS-II reaction center complex... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.05G041400.1 | PSBB, Ceric.05G041400 | component *(PsbB/CP47) of PS-II reaction center complex... | 0.11 | OrthoFinder output from all 47 species | |
| Ceric.05G051100.1 | PSBB, Ceric.05G051100 | component *(PsbB/CP47) of PS-II reaction center complex... | 0.09 | OrthoFinder output from all 47 species | |
| Ceric.14G009600.1 | PSBB, Ceric.14G009600 | not classified & original description: pacid=50634641... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.19G038500.1 | PSBB, Ceric.19G038500 | not classified & original description: pacid=50576616... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z019400.1 | PSBB, Ceric.1Z019400 | component *(PsbB/CP47) of PS-II reaction center complex... | 0.09 | OrthoFinder output from all 47 species | |
| Ceric.1Z021200.1 | PSBB, Ceric.1Z021200 | component *(PsbB/CP47) of PS-II reaction center complex... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.1Z162800.1 | PSBB, Ceric.1Z162800 | component *(PsbB/CP47) of PS-II reaction center complex... | 0.1 | OrthoFinder output from all 47 species | |
| Ceric.30G038800.1 | PSBB, Ceric.30G038800 | not classified & original description: pacid=50609266... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.38G008000.1 | PSBB, Ceric.38G008000 | component *(PsbB/CP47) of PS-II reaction center complex... | 0.11 | OrthoFinder output from all 47 species | |
| Dac_g09466 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g21021 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.11 | OrthoFinder output from all 47 species | |
| Dde_g03407 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01006503001 | PSBB | Photosystem II CP47 reaction center protein OS=Phaseolus vulgaris | 0.04 | OrthoFinder output from all 47 species | |
| Gb_23567 | PSBB | component PsbB/CP47 of PS-II reaction center complex | 0.08 | OrthoFinder output from all 47 species | |
| Gb_27294 | PSBB | Photosystem II CP47 reaction center protein OS=Cycas... | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os06g39708.1 | PSBB, LOC_Os06g39708 | component PsbB/CP47 of PS-II reaction center complex | 0.15 | OrthoFinder output from all 47 species | |
| LOC_Os09g04680.1 | PSBB, LOC_Os09g04680 | Photosystem II CP47 reaction center protein OS=Oryza... | 0.12 | OrthoFinder output from all 47 species | |
| LOC_Os10g21310.1 | PSBB, LOC_Os10g21310 | component PsbB/CP47 of PS-II reaction center complex | 0.13 | OrthoFinder output from all 47 species | |
| LOC_Os12g10600.1 | PSBB, LOC_Os12g10600 | Photosystem II CP47 reaction center protein OS=Oryza... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g04892 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.11 | OrthoFinder output from all 47 species | |
| Mpzg01020.1 | PSBB | component PsbB/CP47 of PS-II reaction center complex | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g21439 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g02100 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.11 | OrthoFinder output from all 47 species | |
| Pir_g05119 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.06 | OrthoFinder output from all 47 species | |
| Pnu_g00696 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0202.g025627 | PSBB | not classified & original description: CDS=1-339 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g10281 | No alias | component *(PsbB/CP47) of PS-II reaction center complex... | 0.06 | OrthoFinder output from all 47 species | |
| Smo137729 | PSBB | Photosystem II CP47 reaction center protein OS=Angiopteris evecta | 0.08 | OrthoFinder output from all 47 species | |
| Solyc00g500024.1.1 | PSBB, Solyc00g500024 | component PsbB/CP47 of PS-II reaction center complex | 0.12 | OrthoFinder output from all 47 species | |
| Solyc00g500071.1.1 | PSBB, Solyc00g500071 | component PsbB/CP47 of PS-II reaction center complex | 0.12 | OrthoFinder output from all 47 species | |
| Spa_g04296 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006488 | dolichol-linked oligosaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0006490 | oligosaccharide-lipid intermediate biosynthetic process | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006553 | lysine metabolic process | IEP | HCCA |
| BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008837 | diaminopimelate epimerase activity | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009085 | lysine biosynthetic process | IEP | HCCA |
| BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | HCCA |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009579 | thylakoid | IEP | HCCA |
| BP | GO:0009767 | photosynthetic electron transport chain | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| MF | GO:0016168 | chlorophyll binding | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016854 | racemase and epimerase activity | IEP | HCCA |
| MF | GO:0016855 | racemase and epimerase activity, acting on amino acids and derivatives | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0019684 | photosynthesis, light reaction | IEP | HCCA |
| BP | GO:0022900 | electron transport chain | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0036361 | racemase activity, acting on amino acids and derivatives | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| BP | GO:0046451 | diaminopimelate metabolic process | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| MF | GO:0047661 | amino-acid racemase activity | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |