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  5. Sacu_v1.1_s0004.g002060

Sacu_v1.1_s0004.g002060


Description : not classified & original description: CDS=9-2273


Gene families : OG0001758 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001758_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0004.g002060

Target Alias Description ECC score Gene Family Method Actions
AT2G26920 No alias Ubiquitin-associated/translation elongation factor EF1B protein 0.03 OrthoFinder output from all 47 species
AT5G12120 No alias Ubiquitin-associated/translation elongation factor EF1B protein 0.01 OrthoFinder output from all 47 species
Adi_g036668 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g089062 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26136 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G013900.1 Ceric.25G013900 not classified & original description: pacid=50594627... 0.03 OrthoFinder output from all 47 species
Ehy_g18873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo405547 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc06g073600.4.1 Solyc06g073600 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR015940 UBA 210 240
No external refs found!