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  5. Sacu_v1.1_s0003.g001995

Sacu_v1.1_s0003.g001995


Description : not classified & original description: CDS=1-957


Gene families : OG0001138 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001138_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0003.g001995
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene61069.t1 Aspi01Gene61069 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25287 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g01146 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR012458 DUF1664 99 217
No external refs found!