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  5. Sacu_v1.1_s0003.g001935

Sacu_v1.1_s0003.g001935


Description : not classified & original description: CDS=1-2133


Gene families : OG0000236 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000236_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0003.g001935
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00048210 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00106p00150110 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00131p00054800 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00131p00055770 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G16750 No alias Protein of unknown function, DUF547 0.06 OrthoFinder output from all 47 species
AT1G43020 No alias Protein of unknown function, DUF547 0.03 OrthoFinder output from all 47 species
AT2G39690 No alias Protein of unknown function, DUF547 0.06 OrthoFinder output from all 47 species
AT3G12540 No alias Protein of unknown function, DUF547 0.05 OrthoFinder output from all 47 species
AT5G60720 No alias Protein of unknown function, DUF547 0.03 OrthoFinder output from all 47 species
Adi_g060877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115514 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g28628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g29125 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g20675 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03826 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10150 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g13551 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g16129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36638 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g21128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07461 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g08833 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g11890 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g22125 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g009681 No alias not classified & original description: CDS=140-2005 0.04 OrthoFinder output from all 47 species
Azfi_s0064.g035514 No alias not classified & original description: CDS=742-2646 0.06 OrthoFinder output from all 47 species
Cba_g03959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g24608 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g34443 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g39103 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G060000.1 Ceric.02G060000 not classified & original description: pacid=50584416... 0.07 OrthoFinder output from all 47 species
Ceric.05G072100.1 Ceric.05G072100 not classified & original description: pacid=50579173... 0.03 OrthoFinder output from all 47 species
Ceric.12G063900.1 Ceric.12G063900 not classified & original description: pacid=50600480... 0.06 OrthoFinder output from all 47 species
Ceric.19G019200.1 Ceric.19G019200 not classified & original description: pacid=50576159... 0.04 OrthoFinder output from all 47 species
Ceric.20G014100.1 Ceric.20G014100 not classified & original description: pacid=50566742... 0.03 OrthoFinder output from all 47 species
Dac_g12477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14778 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38820 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08174 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g37118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50801 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g23028 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06906 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01001955001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01002634001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01004457001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01004717001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01025228001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01029449001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_10011 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_16429 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g05480.3 LOC_Os01g05480 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g05900.1 LOC_Os02g05900 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g13130.2 LOC_Os03g13130 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g64230.1 LOC_Os03g64230 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g47770.1 LOC_Os06g47770 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g49060.1 LOC_Os06g49060 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os07g03140.1 LOC_Os07g03140 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g40420.1 LOC_Os08g40420 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g28850.1 LOC_Os09g28850 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g41040.1 LOC_Os10g41040 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g59225 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g27106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38169 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g39853 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_124933g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_19648g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp1g27890.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Nbi_g07704 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g09584 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g10137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40858 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14919 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03170 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo424121 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc01g109270.3.1 Solyc01g109270 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g008560.2.1 Solyc06g008560 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Solyc08g078520.4.1 Solyc08g078520 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc10g051030.2.1 Solyc10g051030 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g069840.3.1 Solyc11g069840 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g10823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g13793 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g14701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53943 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29415 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002322_P002 Zm00001e002322 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e005808_P001 Zm00001e005808 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e009970_P005 Zm00001e009970 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e011613_P001 Zm00001e011613 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e013087_P001 Zm00001e013087 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e021904_P001 Zm00001e021904 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e034388_P001 Zm00001e034388 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e034560_P003 Zm00001e034560 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006869 DUF547 485 619
IPR025757 MIP1_Leuzipper 92 180
No external refs found!