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  5. Sacu_v1.1_s0003.g001853

Sacu_v1.1_s0003.g001853 (iqd2)


Aliases : iqd2

Description : not classified & original description: CDS=1-1665


Gene families : OG0000740 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000740_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0003.g001853

Target Alias Description ECC score Gene Family Method Actions
AT2G26410 Iqd4 IQ-domain 4 0.03 OrthoFinder output from all 47 species
AT5G03040 iqd2 IQ-domain 2 0.03 OrthoFinder output from all 47 species
Aev_g01302 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33731 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39198 IQD3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G023100.1 IQD3, Ceric.04G023100 not classified & original description: pacid=50631453... 0.03 OrthoFinder output from all 47 species
Ehy_g04615 IQD6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05877 IQD5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06790 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06944 iqd2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01025635001 IQD3 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_20874 iqd2 microtubule - plasma membrane linkage regulator (IQD13) 0.02 OrthoFinder output from all 47 species
Gb_32308 iqd17 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp3g23600.1 IQD3 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g31509 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo67789 iqd2 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
CC GO:0000145 exocyst IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0005375 copper ion transmembrane transporter activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0035434 copper ion transmembrane transport IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR025064 DUF4005 478 539
IPR000048 IQ_motif_EF-hand-BS 134 151
No external refs found!