Description : not classified & original description: CDS=1-2223
Gene families : OG0000861 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000861_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sacu_v1.1_s0003.g001585 | |
Cluster | HCCA: Cluster_41 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G28380 | NSL1 | MAC/Perforin domain-containing protein | 0.03 | OrthoFinder output from all 47 species | |
Adi_g055197 | No alias | regulatory protein *(CAD1) of Programmed Cell Death &... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.18G061900.1 | Ceric.18G061900 | regulatory protein *(CAD1) of Programmed Cell Death &... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g54510.1 | CAD1, LOC_Os01g54510 | MACPF domain-containing protein CAD1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Mp5g18270.1 | CAD1 | MACPF domain-containing protein CAD1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g10877 | CAD1 | regulatory protein *(CAD1) of Programmed Cell Death &... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g19382 | No alias | regulatory protein *(CAD1) of Programmed Cell Death &... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g26335 | No alias | regulatory protein *(CAD1) of Programmed Cell Death &... | 0.04 | OrthoFinder output from all 47 species | |
Solyc02g077780.3.1 | NSL1, Solyc02g077780 | MACPF domain-containing protein NSL1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g02759 | CAD1 | regulatory protein *(CAD1) of Programmed Cell Death &... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e019816_P001 | CAD1, Zm00001e019816 | MACPF domain-containing protein CAD1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e022542_P001 | Zm00001e022542 | MACPF domain-containing protein At1g14780 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e029690_P001 | Zm00001e029690 | MACPF domain-containing protein At4g24290 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004519 | endonuclease activity | IEP | HCCA |
MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
MF | GO:0004525 | ribonuclease III activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
MF | GO:0004560 | alpha-L-fucosidase activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
CC | GO:0005783 | endoplasmic reticulum | IEP | HCCA |
BP | GO:0006457 | protein folding | IEP | HCCA |
BP | GO:0007034 | vacuolar transport | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0009314 | response to radiation | IEP | HCCA |
BP | GO:0009411 | response to UV | IEP | HCCA |
BP | GO:0009416 | response to light stimulus | IEP | HCCA |
BP | GO:0009628 | response to abiotic stimulus | IEP | HCCA |
BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
BP | GO:0009725 | response to hormone | IEP | HCCA |
BP | GO:0009733 | response to auxin | IEP | HCCA |
BP | GO:0010033 | response to organic substance | IEP | HCCA |
MF | GO:0015928 | fucosidase activity | IEP | HCCA |
MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
CC | GO:0017119 | Golgi transport complex | IEP | HCCA |
MF | GO:0032182 | ubiquitin-like protein binding | IEP | HCCA |
MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | HCCA |
MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
BP | GO:0042221 | response to chemical | IEP | HCCA |
MF | GO:0043130 | ubiquitin binding | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0050896 | response to stimulus | IEP | HCCA |
MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR020864 | MACPF | 111 | 317 |
No external refs found! |