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  5. Sacu_v1.1_s0003.g001521

Sacu_v1.1_s0003.g001521 (ZIFL1)


Aliases : ZIFL1

Description : not classified & original description: CDS=1-1239


Gene families : OG0000366 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000366_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0003.g001521
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Adi_g025652 ZIFL1 metal chelator transporter *(ZIF/TOM) & original... 0.04 OrthoFinder output from all 47 species
Dac_g13140 ZIFL1 metal chelator transporter *(ZIF/TOM) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os12g03860.1 ZIFL1, LOC_Os12g03860 metal chelator transporter (ZIF/TOM) 0.03 OrthoFinder output from all 47 species
LOC_Os12g03950.1 ZIFL2, LOC_Os12g03950 metal chelator transporter (ZIF/TOM) 0.02 OrthoFinder output from all 47 species
Msp_g39733 ZIFL1 metal chelator transporter *(ZIF/TOM) & original... 0.01 OrthoFinder output from all 47 species
Sam_g50885 No alias metal chelator transporter *(ZIF/TOM) & original... 0.03 OrthoFinder output from all 47 species
Smo441678 No alias No description available 0.02 OrthoFinder output from all 47 species
Zm00001e024065_P002 ZIFL1, Zm00001e024065 metal chelator transporter (ZIF/TOM) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030259 lipid glycosylation IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR011701 MFS 57 148
No external refs found!