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  5. Sacu_v1.1_s0003.g001501

Sacu_v1.1_s0003.g001501


Description : not classified & original description: CDS=1-1170


Gene families : OG0000047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0003.g001501

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene30261.t1 Aspi01Gene30261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33037.t1 Aspi01Gene33037 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60350.t1 Aspi01Gene60350 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0014.g013546 No alias not classified & original description: CDS=1-774 0.02 OrthoFinder output from all 47 species
Dcu_g39045 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21748 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000930 gamma-tubulin complex IEP HCCA
CC GO:0000931 gamma-tubulin ring complex IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0031503 protein-containing complex localization IEP HCCA
BP GO:0033566 gamma-tubulin complex localization IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!