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  5. Sacu_v1.1_s0003.g001448

Sacu_v1.1_s0003.g001448


Description : component *(NdhS) of NDH electron donor-binding subcomplex E & original description: CDS=1-795


Gene families : OG0007891 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007891_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0003.g001448

Target Alias Description ECC score Gene Family Method Actions
Aev_g14708 No alias component *(NdhS) of NDH electron donor-binding... 0.07 OrthoFinder output from all 47 species
Ala_g08748 No alias component *(NdhS) of NDH electron donor-binding... 0.05 OrthoFinder output from all 47 species
Als_g27008 No alias component *(NdhS) of NDH electron donor-binding... 0.06 OrthoFinder output from all 47 species
Aop_g02044 No alias component *(NdhS) of NDH electron donor-binding... 0.07 OrthoFinder output from all 47 species
Azfi_s0051.g031476 No alias component *(NdhS) of NDH electron donor-binding... 0.03 OrthoFinder output from all 47 species
Cba_g08881 No alias component *(NdhS) of NDH electron donor-binding... 0.07 OrthoFinder output from all 47 species
Ceric.13G031600.1 Ceric.13G031600 component *(NdhS) of NDH electron donor-binding... 0.05 OrthoFinder output from all 47 species
Dac_g22468 No alias component *(NdhS) of NDH electron donor-binding... 0.06 OrthoFinder output from all 47 species
Dac_g27702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g14687 No alias component *(NdhS) of NDH electron donor-binding... 0.08 OrthoFinder output from all 47 species
Ehy_g12308 No alias component *(NdhS) of NDH electron donor-binding... 0.09 OrthoFinder output from all 47 species
GSVIVT01019536001 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.03 OrthoFinder output from all 47 species
LOC_Os07g09800.1 LOC_Os07g09800 component NdhS of NDH electron donor-binding subcomplex E 0.04 OrthoFinder output from all 47 species
Len_g16667 No alias component *(NdhS) of NDH electron donor-binding... 0.04 OrthoFinder output from all 47 species
Nbi_g28727 No alias component *(NdhS) of NDH electron donor-binding... 0.05 OrthoFinder output from all 47 species
Ore_g07963 No alias component *(NdhS) of NDH electron donor-binding... 0.02 OrthoFinder output from all 47 species
Ore_g07964 No alias component *(NdhS) of NDH electron donor-binding... 0.04 OrthoFinder output from all 47 species
Pir_g20002 No alias component *(NdhS) of NDH electron donor-binding... 0.05 OrthoFinder output from all 47 species
Smo413659 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.03 OrthoFinder output from all 47 species
Solyc08g082400.1.1 Solyc08g082400 component NdhS of NDH electron donor-binding subcomplex E 0.03 OrthoFinder output from all 47 species
Spa_g18947 No alias component *(NdhS) of NDH electron donor-binding... 0.05 OrthoFinder output from all 47 species
Spa_g24564 No alias component *(NdhS) of NDH electron donor-binding... 0.04 OrthoFinder output from all 47 species
Tin_g15455 No alias component *(NdhS) of NDH electron donor-binding... 0.09 OrthoFinder output from all 47 species
Zm00001e012952_P001 Zm00001e012952 component NdhS of NDH electron donor-binding subcomplex E 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009767 photosynthetic electron transport chain IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP HCCA
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR021659 NdhS 182 233
No external refs found!