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  5. Sacu_v1.1_s0003.g001432

Sacu_v1.1_s0003.g001432


Description : not classified & original description: CDS=1-912


Gene families : OG0000463 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000463_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0003.g001432

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00115700 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g110824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g36982 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G000700.1 Ceric.03G000700 not classified & original description: pacid=50572251... 0.03 OrthoFinder output from all 47 species
Ceric.03G000900.1 Ceric.03G000900 not classified & original description: pacid=50571733... 0.04 OrthoFinder output from all 47 species
Ceric.03G013700.1 Ceric.03G013700 not classified & original description: pacid=50571296... 0.03 OrthoFinder output from all 47 species
Dac_g28161 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g04230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01029849001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os05g45070.1 LOC_Os05g45070 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g02730.1 LOC_Os11g02730 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g36132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10435817g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp3g06270.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g23987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002223 No alias not classified & original description: CDS=1-618 0.04 OrthoFinder output from all 47 species
Solyc08g082470.1.1 Solyc08g082470 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Spa_g27677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004864 LEA_2 110 208
No external refs found!