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  5. Sacu_v1.1_s0002.g001148

Sacu_v1.1_s0002.g001148


Description : E3 ubiquitin ligase *(RNF170) & original description: CDS=249-863


Gene families : OG0005323 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005323_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0002.g001148

Target Alias Description ECC score Gene Family Method Actions
Dac_g13155 No alias E3 ubiquitin ligase *(RNF170) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g51829 No alias E3 ubiquitin ligase *(RNF170) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
InterPro domains Description Start Stop
IPR010652 DUF1232 154 186
No external refs found!