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  5. Sacu_v1.1_s0002.g001085

Sacu_v1.1_s0002.g001085


Description : cation exchanger *(NCL/EF-CAX) & original description: CDS=159-1823


Gene families : OG0000757 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000757_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0002.g001085

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0205.g057755 No alias cation exchanger *(NCL/EF-CAX) & original description: CDS=1-1812 0.03 OrthoFinder output from all 47 species
Dac_g21349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e026032_P005 Zm00001e026032 cation exchanger (NCL/EF-CAX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 288 349
IPR004837 NaCa_Exmemb 64 219
IPR004837 NaCa_Exmemb 402 542
No external refs found!