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  5. Sacu_v1.1_s0002.g000862

Sacu_v1.1_s0002.g000862


Description : not classified & original description: CDS=2215-2910


Gene families : OG0002749 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002749_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0002.g000862

Target Alias Description ECC score Gene Family Method Actions
Als_g08056 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.30G053100.1 Ceric.30G053100 not classified & original description: pacid=50609566... 0.03 OrthoFinder output from all 47 species
Dcu_g33772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03076 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g21799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g01503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55565 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!