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  5. Ehy_g05808

Ehy_g05808


Description : not classified & original description: none


Gene families : OG0000309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g05808
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Als_g50140 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s3305.g115285 No alias not classified & original description: CDS=1-1707 0.01 OrthoFinder output from all 47 species
Dac_g07418 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g11331 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35395 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007825001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01035639001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_33498 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g13140.1 LOC_Os01g13140 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os06g13140.1 LOC_Os06g13140 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g36542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431396g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_107471g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pnu_g23436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08501 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g068250.2.1 Solyc01g068250 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc03g111780.1.1 Solyc03g111780 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc03g113850.1.1 Solyc03g113850 Protein JINGUBANG OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Solyc04g005020.3.1 Solyc04g005020 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g35902 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g13772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007790_P001 Zm00001e007790 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP HCCA
MF GO:0004000 adenosine deaminase activity IEP HCCA
BP GO:0006382 adenosine to inosine editing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016553 base conversion or substitution editing IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 507 550
IPR001680 WD40_repeat 334 363
IPR001680 WD40_repeat 463 497
IPR001680 WD40_repeat 415 451
No external refs found!