Sacu_v1.1_s0002.g000809 (BRCA2(V), BRCA2B, ATBRCA2(V))

Aliases : BRCA2(V), BRCA2B, ATBRCA2(V)

Description : component *(BRCA2) of regulatory BRCC deubiquination complex & original description: CDS=493-3384

Gene families : OG0007523 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007523_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0002.g000809
Cluster	HCCA: Cluster_55

Target	Alias	Description	ECC score	Gene Family Method	Actions
Sam_g26572	No alias	component *(BRCA2) of regulatory BRCC deubiquination...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000724	double-strand break repair via homologous recombination	IEA	Interproscan
BP	GO:0000725	recombinational repair	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	None	Extended
BP	GO:0006302	double-strand break repair	None	Extended
BP	GO:0006310	DNA recombination	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000723	telomere maintenance	IEP	HCCA
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0004649	poly(ADP-ribose) glycohydrolase activity	IEP	HCCA
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	HCCA
CC	GO:0005667	transcription regulator complex	IEP	HCCA
CC	GO:0005669	transcription factor TFIID complex	IEP	HCCA
BP	GO:0006282	regulation of DNA repair	IEP	HCCA
BP	GO:0006325	chromatin organization	IEP	HCCA
BP	GO:0006338	chromatin remodeling	IEP	HCCA
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0031491	nucleosome binding	IEP	HCCA
BP	GO:0032200	telomere organization	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
BP	GO:0051052	regulation of DNA metabolic process	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0080134	regulation of response to stress	IEP	HCCA
BP	GO:0080135	regulation of cellular response to stress	IEP	HCCA
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	HCCA
BP	GO:2001020	regulation of response to DNA damage stimulus	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR015252	BRCA2_hlx	565	637
IPR015187	BRCA2_OB_1	642	760

External Links

No external refs found!