Sacu_v1.1_s0001.g000772 (AtGH9C3, GH9C3)

Aliases : AtGH9C3, GH9C3

Description : class-C endo-1,4-beta-glucanase & original description: CDS=627-2531

Gene families : OG0000240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000240_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0001.g000772

Target	Alias	Description	ECC score	Gene Family Method
AT1G70710	CEL1, GH9B1, ATGH9B1	glycosyl hydrolase 9B1	0.01	OrthoFinder output from all 47 species
Aspi01Gene29399.t1	AtGH9B5, GH9B5,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene43497.t2	ATCEL2, CEL2,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ehy_g12625	AtGH9B7, GH9B7	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Gb_21027	AtGH9C3, GH9C3	Endoglucanase 6 OS=Arabidopsis thaliana...	0.08	OrthoFinder output from all 47 species
LOC_Os01g21070.1	AtGH9B13,...	Endoglucanase 3 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
MA_79718g0010	AtGH9B13, GH9B13	Endoglucanase 17 OS=Arabidopsis thaliana...	0.01	OrthoFinder output from all 47 species
Pp3c19_18640V3.1	AtGH9B13,...	glycosyl hydrolase 9B8	0.01	OrthoFinder output from all 47 species
Ppi_g62195	GH9C2, AtGH9C2	class-C endo-1,4-beta-glucanase & original description: none	0.01	OrthoFinder output from all 47 species
Ppi_g63529	GH9C2, AtGH9C2	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0278.g027084	GH9C2, AtGH9C2	class-C endo-1,4-beta-glucanase & original description:...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0030246	carbohydrate binding	IEA	Interproscan
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001701	Glyco_hydro_9	33	494
IPR019028	CBM_49	535	612

External Links

No external refs found!