Description : E3 ubiquitin ligase *(RMA/MUSE) & original description: CDS=1-1875
Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sacu_v1.1_s0001.g000757 | |
Cluster | HCCA: Cluster_4 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g008787 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g24081 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g07861 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g09681 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g13035 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dac_g38085 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01009643001 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
Gb_11311 | No alias | RING-HC-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g56070.3 | LOC_Os01g56070 | RING-HC-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os05g39380.1 | LOC_Os05g39380 | RING-HC-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g04855 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g07919 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g38674 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g15941 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc10g078900.3.1 | Solyc10g078900 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e026195_P001 | Zm00001e026195 | RING-HC-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e031880_P001 | Zm00001e031880 | RING-HC-class E3 ligase | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
MF | GO:0004620 | phospholipase activity | IEP | HCCA |
MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
BP | GO:0005984 | disaccharide metabolic process | IEP | HCCA |
BP | GO:0005991 | trehalose metabolic process | IEP | HCCA |
BP | GO:0005992 | trehalose biosynthetic process | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | HCCA |
BP | GO:0009311 | oligosaccharide metabolic process | IEP | HCCA |
BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | HCCA |
MF | GO:0010181 | FMN binding | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
MF | GO:0016298 | lipase activity | IEP | HCCA |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0046351 | disaccharide biosynthetic process | IEP | HCCA |
MF | GO:0050290 | sphingomyelin phosphodiesterase D activity | IEP | HCCA |
MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 325 | 367 |
No external refs found! |