1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0001.g000737

Sacu_v1.1_s0001.g000737


Description : not classified & original description: CDS=1-2565


Gene families : OG0000712 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000712_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0001.g000737
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Als_g20545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g48546 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e032451_P001 Zm00001e032451 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR009719 GIP1_N 35 93
No external refs found!