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  5. Sacu_v1.1_s0001.g000654

Sacu_v1.1_s0001.g000654


Description : not classified & original description: CDS=619-2565


Gene families : OG0002017 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002017_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0001.g000654

Target Alias Description ECC score Gene Family Method Actions
Aev_g14602 emb1075 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60054.t1 emb1075, Aspi01Gene60054 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0422.g069190 emb1075 not classified & original description: CDS=1-1872 0.04 OrthoFinder output from all 47 species
Cba_g02605 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35565 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g44525 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g44133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g49097 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g19174 emb1075 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g28642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48346 GAD2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g37246 emb1075 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12748 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g13778 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g23357 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g39755 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g27313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60370 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g63978 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000639 No alias not classified & original description: CDS=38-1963 0.04 OrthoFinder output from all 47 species
Smo270727 emb1075 Histidine decarboxylase OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
Tin_g28645 emb1075 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g31488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016830 carbon-carbon lyase activity IEA Interproscan
BP GO:0019752 carboxylic acid metabolic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
InterPro domains Description Start Stop
IPR002129 PyrdxlP-dep_de-COase 320 474
No external refs found!