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  5. Sacu_v1.1_s0001.g000639

Sacu_v1.1_s0001.g000639


Description : not classified & original description: CDS=38-1963


Gene families : OG0002017 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002017_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0001.g000639

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene22205.t1 emb1075, Aspi01Gene22205 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22207.t1 emb1075, Aspi01Gene22207 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22208.t1 emb1075, Aspi01Gene22208 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22209.t1 emb1075, Aspi01Gene22209 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60054.t1 emb1075, Aspi01Gene60054 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g02605 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g41857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15345 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g44133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g49097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19174 emb1075 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48346 GAD2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13751 emb1075 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41142 emb1075 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g60370 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000654 No alias not classified & original description: CDS=619-2565 0.04 OrthoFinder output from all 47 species
Sam_g05069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22797 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016830 carbon-carbon lyase activity IEA Interproscan
BP GO:0019752 carboxylic acid metabolic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002129 PyrdxlP-dep_de-COase 312 467
No external refs found!