1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0001.g000620

Sacu_v1.1_s0001.g000620


Description : not classified & original description: CDS=1-627


Gene families : OG0001295 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001295_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0001.g000620

Target Alias Description ECC score Gene Family Method Actions
Adi_g005432 LSB1, GDU3, ATGDU3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15097 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_262g0010 GDU5, AtGDU5 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_279651g0010 LSB1, GDU3, ATGDU3 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Msp_g08969 AtGDU6, GDU6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18339 GDU5, AtGDU5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23774 ATGDU2, GDU2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e037710_P001 AtGDU4, GDU4,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA

No InterPro domains available for this sequence

No external refs found!