Description : not classified & original description: CDS=1-1413
Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g018551 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g042987 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g117369 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g24129 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g10341 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene06166.t1 | Aspi01Gene06166 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene47653.t1 | Aspi01Gene47653 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene69044.t1 | Aspi01Gene69044 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0007.g010823 | No alias | not classified & original description: CDS=686-1789 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0195.g057243 | No alias | not classified & original description: CDS=263-1516 | 0.05 | OrthoFinder output from all 47 species | |
Cba_g15471 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g15473 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g34526 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cre07.g330300 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
Dcu_g21405 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g46989 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g03669 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g07789 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g16051 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Gb_29426 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Gb_29428 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Gb_32677 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
Gb_35079 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Gb_39961 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g12850.1 | LOC_Os02g12850 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os10g33230.1 | LOC_Os10g33230 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
MA_125759g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
MA_79622g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
MA_93349g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Msp_g05437 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g00523 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g06388 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g09717 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g42376 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g42383 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g093340.3.1 | Solyc02g093340 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g07882 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g08933 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g11285 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g21333 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g26586 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g30731 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e014461_P003 | Zm00001e014461 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e024934_P002 | Zm00001e024934 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e030652_P001 | Zm00001e030652 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e037155_P004 | Zm00001e037155 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0003924 | GTPase activity | IEP | HCCA |
MF | GO:0004455 | ketol-acid reductoisomerase activity | IEP | HCCA |
MF | GO:0004590 | orotidine-5'-phosphate decarboxylase activity | IEP | HCCA |
MF | GO:0004743 | pyruvate kinase activity | IEP | HCCA |
MF | GO:0004784 | superoxide dismutase activity | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
BP | GO:0006096 | glycolytic process | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
BP | GO:0006206 | pyrimidine nucleobase metabolic process | IEP | HCCA |
BP | GO:0006207 | 'de novo' pyrimidine nucleobase biosynthetic process | IEP | HCCA |
BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
BP | GO:0006367 | transcription initiation at RNA polymerase II promoter | IEP | HCCA |
BP | GO:0006414 | translational elongation | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
BP | GO:0006801 | superoxide metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0009081 | branched-chain amino acid metabolic process | IEP | HCCA |
BP | GO:0009082 | branched-chain amino acid biosynthetic process | IEP | HCCA |
BP | GO:0009112 | nucleobase metabolic process | IEP | HCCA |
BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0010024 | phytochromobilin biosynthetic process | IEP | HCCA |
BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
MF | GO:0016636 | oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor | IEP | HCCA |
MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | HCCA |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
BP | GO:0019856 | pyrimidine nucleobase biosynthetic process | IEP | HCCA |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
MF | GO:0030955 | potassium ion binding | IEP | HCCA |
BP | GO:0031123 | RNA 3'-end processing | IEP | HCCA |
BP | GO:0031124 | mRNA 3'-end processing | IEP | HCCA |
MF | GO:0031420 | alkali metal ion binding | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | HCCA |
BP | GO:0043650 | dicarboxylic acid biosynthetic process | IEP | HCCA |
BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
BP | GO:0046112 | nucleobase biosynthetic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
MF | GO:0050897 | cobalt ion binding | IEP | HCCA |
BP | GO:0051202 | phytochromobilin metabolic process | IEP | HCCA |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | HCCA |
BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0072593 | reactive oxygen species metabolic process | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No external refs found! |