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  5. Sacu_v1.1_s0001.g000330

Sacu_v1.1_s0001.g000330


Description : tRNA guanine-methyltransferase *(TRM5) & original description: CDS=57-1598


Gene families : OG0002428 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002428_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0001.g000330

Target Alias Description ECC score Gene Family Method Actions
Adi_g059311 No alias tRNA guanine-methyltransferase *(TRM5) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os02g39370.1 LOC_Os02g39370 tRNA guanosine-methyltransferase (TRM5) 0.02 OrthoFinder output from all 47 species
Lfl_g10033 No alias tRNA guanine-methyltransferase *(TRM5) & original... 0.02 OrthoFinder output from all 47 species
Pir_g59925 No alias tRNA guanine-methyltransferase *(TRM5) & original... 0.04 OrthoFinder output from all 47 species
Sam_g12584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR030382 MeTrfase_TRM5/TYW2 183 425
No external refs found!