- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : ARF4
Description : not classified & original description: CDS=1-1212
Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G19850 | MP, IAA24, ARF5 | Transcriptional factor B3 family protein /... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g059116 | ARF6 | transcriptional repressor *(IAA/AUX) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g02591 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g07961 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g33211 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene27221.t1 | ARF16, Aspi01Gene27221 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07702 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.03G061000.1 | HSS, ARF1-BP,... | ARF-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g23659 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01015035001 | ARF19, IAA22, ARF11 | RNA biosynthesis.transcriptional activation.B3... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01019566001 | ARF9 | RNA biosynthesis.transcriptional activation.B3... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01023149001 | ARF1 | RNA biosynthesis.transcriptional activation.B3... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01037136001 | ARF1 | RNA biosynthesis.transcriptional activation.B3... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_02925 | ARF19, IAA22, ARF11 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_39685 | ARF6 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g41950.1 | ARF6, LOC_Os12g41950 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g08347 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g14660 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07072 | ARF16 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g18657 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_55076g0010 | ARF6 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g12750.1 | ARF6 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g19283 | ARF4 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g04439 | ARF10 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g51872 | No alias | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g077560.3.1 | ARF3, ETT, Solyc02g077560 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g12615 | ARF16 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g51847 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e018126_P002 | ARF6, Zm00001e018126 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e025163_P001 | ARF6, Zm00001e025163 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0002097 | tRNA wobble base modification | IEP | HCCA |
| BP | GO:0002098 | tRNA wobble uridine modification | IEP | HCCA |
| BP | GO:0006400 | tRNA modification | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| CC | GO:0033588 | elongator holoenzyme complex | IEP | HCCA |
| MF | GO:0042393 | histone binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR033389 | AUX/IAA_dom | 276 | 379 |
| No external refs found! |