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  5. Azfi_s3759.g116773

Azfi_s3759.g116773 (CRR2)


Aliases : CRR2

Description : not classified & original description: CDS=1-1509


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s3759.g116773
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00232800 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g32430,... 0.03 OrthoFinder output from all 47 species
Aev_g15170 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g21644 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07162 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g08870 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g21473 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g38925 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g43685 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g68110 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene02463.t1 Aspi01Gene02463 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12659.t1 Aspi01Gene12659 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16353.t1 Aspi01Gene16353 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23581.t1 Aspi01Gene23581 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35085.t1 Aspi01Gene35085 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene35417.t1 OTP82, Aspi01Gene35417 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44213.t1 Aspi01Gene44213 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05305 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g06233 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g06290 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g11618 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g35085 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.07G078100.1 OTP84, Ceric.07G078100 not classified & original description: pacid=50626860... 0.07 OrthoFinder output from all 47 species
Ceric.07G098300.1 CRR22, Ceric.07G098300 not classified & original description: pacid=50626946... 0.08 OrthoFinder output from all 47 species
Ceric.10G013000.1 EMB2758, Ceric.10G013000 not classified & original description: pacid=50613337... 0.07 OrthoFinder output from all 47 species
Ceric.10G047400.1 OTP84, Ceric.10G047400 not classified & original description: pacid=50612794... 0.05 OrthoFinder output from all 47 species
Ceric.11G067400.1 Ceric.11G067400 not classified & original description: pacid=50595438... 0.05 OrthoFinder output from all 47 species
Ceric.21G054700.1 CRR22, Ceric.21G054700 not classified & original description: pacid=50603698... 0.06 OrthoFinder output from all 47 species
Ceric.33G061000.1 OTP84, Ceric.33G061000 not classified & original description: pacid=50606666... 0.08 OrthoFinder output from all 47 species
Dcu_g17188 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g11227 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g16079 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g22647 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18274 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28692 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g15681 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g16158 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g20310 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g23599 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g23611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05869 OTP86 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g06149 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53018 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15017 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g20089 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g22636 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g30384 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 374 405
IPR046848 E_motif 424 476
IPR002885 Pentatricopeptide_repeat 205 252
IPR002885 Pentatricopeptide_repeat 306 354
IPR002885 Pentatricopeptide_repeat 103 150
IPR002885 Pentatricopeptide_repeat 179 201
No external refs found!