Heatmap: Cluster_1 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Vegetative Sporophyte
Adult Sporophyte
Leaf (0 mg/L NH4NO3)
Leaf (30 mg/L NH4NO3)
Leaf (90 mg/L NH4NO3)
Sporophyte; w/o NH4NO3, w/o cyanobacteria
Sporophyte; w/o NH4NO3, w cyanobacteria
Sporophyte; w NH4NO3, w cyanobacteria
Sporophyte; w NH4NO3, w/o cyanobacteria
Root Tip, D-3 6h mock treated
Root Tip, D-3 6h 0.1 uM IAA treated
Root Tip, D-3 6h 0.5 uM trans-zeatin treated
Microsporocarp
-2.94 -1.0 1.4 1.86 2.44 -3.71 -5.2 - -1.67 -4.38 -3.36 -3.3 -
-0.57 -0.92 0.71 0.66 1.97 -0.51 -1.65 -2.36 -1.7 0.25 -0.04 -0.26 -2.85
-2.03 -0.99 -0.9 -0.47 3.14 -0.78 -2.08 - -0.77 - -1.39 -1.37 -
-4.07 -3.96 0.91 2.63 2.0 - -5.14 -2.5 - -2.08 -2.68 -2.26 -
-1.28 -3.19 1.45 1.8 1.92 -1.56 -1.41 -1.61 -1.58 -1.53 -1.79 -1.77 -2.59
-2.61 -0.82 -1.58 -0.33 2.43 -0.83 -1.35 -1.46 -1.1 -0.28 -0.51 -0.27 0.69
-2.77 -1.06 1.92 1.54 2.07 -2.4 -2.0 -0.82 -2.24 -3.06 -3.47 -4.03 -
-0.85 -3.55 1.38 1.49 1.4 -0.91 -0.74 -1.0 -0.72 -0.76 -0.5 -0.77 -2.36
-1.24 -2.29 1.62 1.72 1.95 -2.17 -2.13 -2.89 -2.98 -1.39 -1.25 -1.21 -2.29
-2.25 -5.78 1.36 2.1 2.02 -2.24 -1.65 -1.87 -1.81 -3.64 -3.42 -3.39 -1.03
- - 2.18 2.4 1.68 - - - - - - - -
-2.89 - 1.81 2.03 1.61 0.66 -1.26 -5.18 -2.28 - - - -
-2.7 - 1.69 1.65 1.67 -0.39 -0.62 -2.78 0.8 - - - -
-8.07 - 1.77 2.41 2.1 -8.71 -9.17 - -7.76 - - - -
-0.57 -3.31 1.17 1.51 2.1 -1.54 -1.74 -1.7 -1.6 -1.46 -1.97 -1.72 -0.64
-0.91 -0.36 1.53 1.75 1.4 -1.84 -1.52 -1.59 -1.44 -1.29 -1.8 -2.14 -0.89
-1.1 -3.88 1.05 1.94 1.9 -1.37 -0.93 -0.78 -0.56 -2.79 -3.16 -2.92 -1.93
-4.36 -2.69 1.92 2.16 1.81 -5.76 -3.54 -2.17 -3.14 -4.79 -2.81 -4.36 -1.38
-0.96 -2.09 1.55 1.5 1.13 -1.09 -1.41 -1.55 -0.65 -0.86 -0.94 -0.83 -0.24
-1.59 -0.29 1.02 1.31 2.47 -3.69 -1.64 -3.0 -3.16 -1.19 -2.06 -2.03 -2.04
-2.12 -3.72 0.98 1.74 1.67 -1.96 -1.11 -1.01 -1.51 -0.63 -1.03 -0.69 -0.16
-6.03 - 1.72 2.37 1.67 -5.0 -3.91 -3.53 - -1.17 -1.59 -1.67 -4.09
-5.25 -1.55 1.69 1.75 2.49 -3.34 -3.04 -4.03 -4.38 -4.07 -5.07 - -
-0.45 -4.28 0.93 2.2 1.91 -0.45 -1.22 -1.83 -2.81 - -2.45 -2.41 -
-7.64 -4.93 2.08 2.26 1.92 - - - - -3.64 -3.45 - -
- - 1.93 2.28 2.12 - - - - - - - -
-2.04 - 1.12 2.5 2.01 - - - - - -0.19 - -
- - 0.91 1.5 2.73 - - - - -0.89 -1.45 -0.41 -
-1.33 -2.77 1.54 1.4 1.06 -0.8 -0.77 -0.77 -0.5 -0.86 -0.66 -0.8 -0.72
-1.3 -2.41 1.24 1.65 1.96 -0.03 -1.03 -0.65 -0.63 - - -4.58 -2.26
-2.81 -3.75 1.92 2.15 1.01 -1.22 -0.22 -2.92 -2.21 -1.95 -1.93 -1.29 -
- - - 2.92 2.45 - - - - - - - -
-2.02 -2.29 0.1 1.93 2.59 -0.3 -0.76 - - - -2.02 - -
- - 1.8 2.81 1.32 - - - - - - - -
-2.78 -1.9 1.8 1.97 2.01 -4.56 -5.15 -5.38 -3.61 -2.05 -4.48 -3.59 -0.67
- -2.87 1.25 2.38 2.32 - - - - -2.8 -2.83 - -
-2.62 -5.45 1.88 1.04 1.96 -1.43 -1.42 -2.8 -3.21 -0.47 -0.47 -0.46 -
-5.67 - 1.95 1.84 2.35 - -5.53 - - -3.18 -3.79 -3.76 -2.45
-13.0 - 1.72 2.65 1.77 - - - - - - - -
-2.71 - - 3.24 1.77 - - - - - - - -
-1.14 -2.95 1.12 1.18 1.49 -1.06 -1.06 -1.08 -0.68 0.01 0.02 0.13 -
- -3.9 2.8 1.52 1.55 - - - - -2.42 - - -
-1.88 -1.59 0.89 1.62 1.93 -1.17 -1.47 -1.48 -0.75 -0.78 -0.98 -1.05 -1.56
-1.8 -1.82 1.68 1.58 0.83 -0.7 -0.8 -0.78 -0.29 -0.85 -0.93 -0.83 -2.21
Azfi_s0033.g025136 (CYP71A25)
- - 2.09 2.35 1.86 - - - - - - - -
-2.6 -3.59 1.51 1.56 1.53 -0.73 -1.64 -1.29 -0.39 -1.3 -0.22 -0.89 -2.59
-4.28 - 1.39 2.3 2.36 - - - -1.94 - - - -
- -9.72 1.74 2.58 1.88 - - - - - - - -
- - 1.52 2.7 1.87 - - - - - - - -
-0.65 -1.37 1.64 1.05 1.53 -0.24 -0.58 -0.85 -0.6 -1.63 -1.77 -1.61 -2.17
-0.84 -4.76 1.3 1.8 1.45 -1.13 -0.94 -0.87 -1.16 -0.93 -1.02 -1.06 -2.1
-1.4 -3.0 1.74 1.49 1.17 -0.69 -1.25 -1.86 -1.61 -0.91 -1.11 -1.11 -0.0
- - - - 3.7 - - - - - - - -
-3.76 -6.07 1.67 2.43 1.82 -4.13 -5.6 - -3.6 -4.8 -3.49 -4.79 -1.05
-1.51 -3.17 1.67 2.26 1.37 -0.56 -0.71 -2.83 -6.45 -1.65 - -2.04 -
-1.26 -0.08 1.43 0.8 2.18 -1.02 -1.61 -1.34 -2.61 -2.52 -3.1 -2.48 -0.29
-0.94 -0.95 1.11 1.04 1.12 -1.09 -0.72 -0.62 -0.31 -0.33 -0.34 -0.32 -0.6
-1.78 -7.59 1.37 1.26 1.38 -1.37 -1.18 -0.92 -1.12 -0.11 -0.03 -0.14 -1.04
-1.18 -1.06 1.49 1.65 1.53 -1.11 -1.34 -1.41 -1.51 -1.8 -2.5 -1.51 -0.25
- - - - 3.7 - - - - - - - -
-4.79 -3.63 1.53 2.28 2.28 - - -1.8 - - - - -
- - 1.72 1.94 2.55 - - - - - - - -
-1.12 -3.84 -0.35 0.77 2.31 -0.91 -0.47 -0.55 -0.3 -1.45 -1.8 -1.53 0.35
-1.87 -1.89 1.61 2.36 0.75 -3.46 -1.39 -1.05 -1.45 -2.55 -4.08 -3.06 -0.15
-2.9 - 1.58 2.41 1.98 -3.17 -3.85 -24.59 -3.14 -3.24 -3.66 -2.79 -
- - - 2.92 2.45 - - - - - - - -
-1.55 -0.75 1.29 1.6 2.52 -1.71 -2.35 -4.54 -4.08 - - - -2.02
-3.9 -1.32 1.6 2.03 1.76 -2.97 -0.96 -1.64 -2.4 -2.63 -2.74 -2.54 -1.32
-2.49 -0.35 2.05 1.33 2.08 -2.34 -2.35 -2.46 -2.25 -4.39 -4.85 -4.78 -2.17
-1.1 -6.25 1.29 1.39 1.63 -0.92 -1.03 -0.98 0.66 -1.42 -2.2 -0.86 -3.17
-1.39 - 1.54 2.38 1.55 -0.62 -1.05 - - - - -1.22 -
-5.11 - 2.37 1.85 1.92 -3.91 -4.72 - -4.29 -3.93 -2.43 - -
- - 1.88 1.92 2.47 - - - - - - - -
-3.86 -3.05 1.76 1.88 1.73 -3.31 -4.12 -4.75 -4.13 -0.41 -1.1 -0.57 -1.87
-5.32 - 1.33 2.5 2.15 -4.25 - - - - - - -1.65
-0.81 -1.28 1.53 1.53 1.51 -1.45 -1.64 -0.99 -1.23 -1.0 -0.64 -0.65 -
-4.76 - 1.43 1.32 2.27 - - -3.27 - -1.05 -2.35 -0.53 0.56
-2.15 - 0.77 2.68 1.73 - -1.41 - -0.05 - - - -
-2.39 -5.84 0.53 0.79 2.2 -1.28 -0.83 -2.5 -1.98 0.27 0.06 0.05 -1.52
-1.78 - 1.42 2.11 1.86 -3.73 -2.09 -2.18 -0.94 -1.83 -2.25 -0.92 -
-1.18 -0.5 1.09 1.12 1.32 -1.26 -0.95 -1.05 -1.04 -0.45 -0.54 -0.63 0.12
-3.06 -1.66 1.19 1.77 1.96 -1.11 -1.12 -1.43 -1.02 -1.31 -1.48 -3.79 -1.48
-1.68 -3.21 1.3 1.19 1.55 -2.34 -1.98 -1.9 -1.69 0.32 0.01 0.37 -1.71
-1.91 -5.02 1.19 1.39 1.34 -0.93 -1.28 -1.56 -0.75 -0.46 -0.12 -0.36 -0.04
-6.24 -1.83 1.8 2.02 2.04 - - - - -4.26 -3.27 -3.23 -0.35
-1.62 -5.03 1.03 1.3 1.84 -1.35 -1.31 -1.33 -1.12 -0.08 -0.17 -0.04 -3.19
-2.36 -6.97 2.09 1.95 2.0 -2.34 -3.64 -3.67 -3.7 -4.37 -4.4 -2.78 -
-0.6 -3.87 1.01 0.97 2.26 -0.74 -0.64 -1.43 -0.36 -1.02 -2.04 -1.41 -
-1.28 -3.93 1.26 1.4 1.43 -1.15 -0.86 -1.0 -1.29 -0.66 -0.46 -0.5 -0.29
-3.4 -0.16 1.15 1.89 2.14 -1.24 -2.29 -3.68 -3.15 -2.25 -3.85 -2.37 -1.32
-0.93 -1.36 1.5 0.78 2.1 -0.08 -0.6 -1.0 -0.49 -3.03 -3.55 -4.25 -2.56
-3.64 -3.76 1.67 2.28 1.76 -1.5 - - - - - - 0.1
-2.3 -3.69 0.72 1.51 1.98 -0.33 -0.83 -0.49 0.27 -1.0 -2.24 -1.71 -
-1.36 -1.45 1.15 1.33 1.32 -0.7 -1.16 -0.53 -1.67 -0.09 -0.24 -0.35 -1.46
-0.98 - 1.46 2.8 0.36 -1.85 -3.15 -2.49 -0.81 -2.52 -2.5 - -
-1.05 -4.56 1.6 1.95 1.57 -2.87 -1.19 -0.86 -2.28 -1.9 -1.92 -1.67 -1.21
-6.77 - 1.65 2.52 2.02 -4.94 -6.83 -7.06 - - - - -
- - 1.97 1.25 2.71 - - - - - - -2.66 -
-0.69 -2.16 0.76 1.4 1.79 -1.8 -0.89 -1.54 -0.72 -0.47 -0.65 -0.45 -0.94
-2.4 -4.89 1.68 1.96 1.48 -1.55 -1.12 -1.48 -1.03 -1.85 -0.68 -1.66 -
-2.6 -1.99 1.67 1.59 2.19 -3.06 -3.56 -1.93 -2.51 -1.95 -1.13 -2.12 -2.08
Azfi_s0214.g058321 (NTMC2T5.1)
- - 2.05 2.11 2.19 - - - - - - - -
-0.71 -1.32 1.42 0.88 2.2 -1.71 -1.07 -1.26 0.34 - -2.34 -2.31 -
-4.01 -1.36 0.59 0.96 1.98 -1.39 -1.03 -0.03 0.26 -1.72 -1.5 -1.71 0.19
-4.04 -5.28 1.02 2.31 1.71 -0.77 -1.45 -2.07 -2.18 -1.12 -0.85 -2.09 -
Azfi_s0233.g059352 (CYP706A3)
-4.13 -5.71 1.88 2.32 1.51 -1.36 -1.69 -2.39 -1.17 - - - -3.87
-0.66 -1.48 0.77 1.72 1.71 -1.97 -1.47 -1.38 -1.39 -0.63 -0.48 -0.55 -1.75
-3.07 - 1.1 2.65 1.11 - -2.08 - -26.57 0.03 -0.93 -0.91 -
-1.7 -2.67 1.43 1.84 1.32 -1.37 -1.1 -0.81 -0.96 -1.58 -1.55 -1.37 -0.39
-1.26 -0.28 0.73 0.75 1.79 0.28 -0.19 -1.46 -1.34 -0.57 -0.64 -0.66 -2.64
-1.83 -1.81 1.74 1.71 1.83 - -0.99 -0.49 -1.31 -2.21 - - -1.2
-0.53 -1.77 0.84 1.45 1.25 -1.09 -1.11 -0.89 -0.87 -0.13 -0.25 -0.14 -1.19
-1.77 -1.59 1.39 1.47 2.11 -4.74 -4.07 - -3.71 0.04 -0.41 -0.52 -
-3.45 -2.36 0.95 0.79 3.05 - -1.4 -1.45 - - - - -
-0.54 -1.25 0.59 1.12 1.63 -0.99 -0.61 -0.58 -0.46 -0.87 -1.13 -0.64 -0.13
-1.5 - 0.42 2.31 1.53 -0.78 -0.91 -0.83 -0.21 -1.49 -1.45 -2.44 -
-1.46 - 1.67 1.84 1.89 - -1.68 -2.03 - -0.54 -1.38 -0.86 -
-0.71 -3.54 1.23 1.42 1.47 -0.46 -0.47 -0.63 -0.43 -0.76 -1.42 -0.95 -2.36
-1.11 -2.46 1.18 2.01 0.9 -0.64 -0.78 0.39 0.12 -1.52 -3.11 -3.09 -
-12.15 -10.78 1.96 2.25 2.12 - - - - - - - -
-2.57 0.35 1.35 1.88 1.42 -1.17 -2.04 -2.81 - -0.77 -0.54 -0.92 -
- - - 2.92 2.45 - - - - - - - -
- - 1.82 3.07 0.08 - - - - - - - -
-4.53 - 1.56 2.33 2.32 - - - - - - - -
- - - 3.7 - - - - - - - - -
-0.59 -1.79 0.8 0.79 2.07 -0.87 -0.57 -0.58 -0.76 -1.6 -1.31 -1.28 -0.42
-4.44 -1.09 1.47 2.09 2.19 -3.86 -4.1 -4.0 -6.89 -1.77 -2.26 -2.9 -4.25
Azfi_s0583.g078505 (NTMC2T5.2)
-2.12 -2.29 1.32 2.09 2.29 -10.83 -2.77 -0.59 -17.47 -5.19 -10.05 -5.09 -4.56
-1.45 -1.44 1.12 2.1 1.77 -1.46 -2.54 -2.69 -1.57 -1.82 -2.03 -2.12 -0.74
-7.91 -4.98 1.99 2.15 2.19 - - - - - - - -
- - 1.86 2.49 1.92 - - - - - - - -
- - 2.31 2.45 1.36 - - - - - - - -
- - - 3.7 - - - - - - - - -
-7.12 0.89 1.79 2.23 1.58 - - - - - - - -
- - 1.43 2.64 1.93 - - - -1.9 - - - -
-2.97 -3.78 1.81 2.7 1.27 - -2.16 - - - - -2.43 -
-6.24 -4.41 1.72 2.42 1.98 -5.34 -5.26 - - -4.01 -3.03 -5.05 -3.74
-2.3 -3.55 0.84 2.14 2.25 -3.44 -1.2 -0.43 -2.4 - - - -1.73
-2.89 -5.15 2.21 1.58 2.31 - - - - - - -1.93 -
-5.43 -4.33 1.6 2.21 2.34 - - -5.02 - -2.84 - - -5.48
- - 0.75 3.01 1.71 - - - - - - - -
-5.02 - 1.64 2.03 1.63 -0.29 -0.94 -1.62 -1.08 -1.6 -4.15 -2.85 -
-7.18 -1.36 2.09 2.03 2.09 - - - - - - - -
-1.5 -4.01 2.19 1.74 1.9 - - - - -1.62 -2.46 -1.15 -
-18.84 - 0.12 2.69 1.92 - - - - -22.71 -30.37 - 0.77
-5.12 -2.28 1.58 2.3 2.16 - - - - -4.24 - -4.16 -1.85
- -0.45 2.0 1.95 2.12 - - - - - - -4.98 -
-3.06 -1.2 1.85 1.85 1.87 -2.22 -1.28 -22.08 - -10.31 -0.24 -3.26 -
- - 0.54 2.12 2.49 -0.61 -1.89 -1.35 -2.67 - - -3.37 -
-3.17 -0.91 1.68 1.8 2.0 -2.77 -3.13 -3.4 -2.97 -1.32 -1.19 -1.53 -6.76
-2.81 -3.75 1.92 2.15 1.01 -1.22 -0.22 -2.92 -2.21 -1.95 -1.93 -1.29 -
-6.21 -6.01 1.92 1.91 2.4 - -4.71 -4.84 - - -3.83 - -
-1.02 -1.75 1.13 1.03 1.47 -1.92 -1.7 -1.23 -1.82 0.28 0.41 0.32 -2.89
-2.9 -0.26 1.0 2.2 2.01 -1.52 -2.56 -1.88 -1.41 -2.64 -5.29 -4.18 -
-3.57 -3.5 1.28 2.59 1.95 -4.38 -4.32 -3.22 -3.16 -3.06 -4.43 -4.56 -
-7.7 -18.23 2.14 2.03 1.56 -1.66 -1.24 -1.06 -2.02 -4.31 - -4.17 -
-3.83 - 2.15 1.6 1.92 - -2.31 -2.51 - - -2.61 -1.58 -0.32
-0.62 -2.42 0.93 2.32 0.98 -1.63 -1.79 -0.21 - -1.24 -0.51 - -0.5
-3.15 -2.65 1.99 1.46 1.98 - -0.62 -1.81 -1.6 -2.23 -3.81 -0.98 -
-27.79 -2.76 1.99 2.49 1.71 -18.58 -9.76 -28.07 -26.77 - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.