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  5. Azfi_s3359.g115484

Azfi_s3359.g115484 (ATUBC7, UBC7)


Aliases : ATUBC7, UBC7

Description : E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1 E3 ubiquitin ligase complex & original description: CDS=161-667


Gene families : OG0001574 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001574_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s3359.g115484

Target Alias Description ECC score Gene Family Method Actions
Als_g06614 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.02 OrthoFinder output from all 47 species
Cba_g29867 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.03 OrthoFinder output from all 47 species
Lfl_g10294 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.01 OrthoFinder output from all 47 species
Ore_g05965 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.02 OrthoFinder output from all 47 species
Pir_g06542 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.01 OrthoFinder output from all 47 species
Smo74865 ATUBC7, UBC7 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Tin_g02459 ATUBC7, UBC7 E2 ubiquiTin-conjugaTing component *(Ubc7/13/14) of HRD1... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 10 156
No external refs found!