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Description : component *(eS21) of small ribosomal-subunit (SSU) proteome & original description: CDS=224-469
Gene families : OG0004049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004049_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Azfi_s2932.g113764 | |
| Cluster | HCCA: Cluster_54 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00045p00200410 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.08 | OrthoFinder output from all 47 species | |
| AT3G53890 | No alias | Ribosomal protein S21e | 0.13 | OrthoFinder output from all 47 species | |
| AT5G27700 | No alias | Ribosomal protein S21e | 0.1 | OrthoFinder output from all 47 species | |
| Aev_g32732 | No alias | component *(eS21) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g29961 | No alias | component *(eS21) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g23096 | No alias | component *(eS21) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0022.g016110 | No alias | component *(eS21) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0185.g056623 | No alias | component *(eS21) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g46482 | No alias | component *(eS21) of small ribosomal-subunit (SSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.37G056600.1 | Ceric.37G056600 | component *(eS21) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020780.14 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Cre03.g203450 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.17 | OrthoFinder output from all 47 species | |
| Dcu_g13598 | No alias | component *(eS21) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g35214 | No alias | component *(eS21) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g15855 | No alias | component *(eS21) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01017756001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.12 | OrthoFinder output from all 47 species | |
| GSVIVT01031151001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.1 | OrthoFinder output from all 47 species | |
| Gb_27652 | No alias | component RPS21 of SSU proteome | 0.1 | OrthoFinder output from all 47 species | |
| Gb_35516 | No alias | component RPS21 of SSU proteome | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os03g46490.1 | LOC_Os03g46490 | component RPS21 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| MA_73657g0010 | No alias | component RPS21 of SSU proteome | 0.05 | OrthoFinder output from all 47 species | |
| Mp4g22150.1 | No alias | component RPS21 of SSU proteome | 0.12 | OrthoFinder output from all 47 species | |
| Ore_g24223 | No alias | component *(eS21) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c24_8160V3.1 | Pp3c24_8160 | Ribosomal protein S21e | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c26_3000V3.1 | Pp3c26_3000 | Ribosomal protein S21e | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0103.g020026 | No alias | component *(eS21) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g07802 | No alias | component *(eS21) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g07803 | No alias | component *(eS21) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Smo271040 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc01g066840.3.1 | Solyc01g066840 | component RPS21 of SSU proteome | 0.07 | OrthoFinder output from all 47 species | |
| Solyc04g074910.3.1 | Solyc04g074910 | component RPS21 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g19976 | No alias | component *(eS21) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e001637_P002 | Zm00001e001637 | component RPS21 of SSU proteome | 0.15 | OrthoFinder output from all 47 species | |
| Zm00001e011684_P002 | Zm00001e011684 | component RPS21 of SSU proteome | 0.09 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000228 | nuclear chromosome | IEP | HCCA |
| CC | GO:0000313 | organellar ribosome | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005694 | chromosome | IEP | HCCA |
| CC | GO:0005761 | mitochondrial ribosome | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |