1. Home
  2. Species
  3. Azolla filiculoides
  4. Sequence
  5. Azfi_s2641.g112487

Azfi_s2641.g112487 (emb1138)


Aliases : emb1138

Description : not classified & original description: CDS=202-2694


Gene families : OG0000466 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000466_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s2641.g112487

Target Alias Description ECC score Gene Family Method Actions
AT3G22310 PMH1, ATRH9 putative mitochondrial RNA helicase 1 0.04 OrthoFinder output from all 47 species
AT3G22330 PMH2, ATRH53 putative mitochondrial RNA helicase 2 0.04 OrthoFinder output from all 47 species
Ala_g10440 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.04 OrthoFinder output from all 47 species
Cba_g18561 PRH75 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G054800.1 emb1138, Ceric.06G054800 not classified & original description: pacid=50619432... 0.04 OrthoFinder output from all 47 species
Ceric.17G055300.1 emb1138, Ceric.17G055300 group-II intron splicing RNA helicase *(RH3) & original... 0.05 OrthoFinder output from all 47 species
Ceric.21G051700.1 emb1138, Ceric.21G051700 group-II intron splicing RNA helicase *(RH3) & original... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020734.25 PMH2, ATRH53 DEAD-box ATP-dependent RNA helicase 53, mitochondrial... 0.02 OrthoFinder output from all 47 species
Dac_g01008 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g08211 PRH75 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21286 emb1138 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g00876 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g21458 PRH75 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000821001 PMH2, ATRH53 RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
Gb_35745 emb1138 RH3 plastidial RNA basal splicing factor 0.03 OrthoFinder output from all 47 species
LOC_Os12g41715.1 PMH2, ATRH53,... RNA helicase (PMH) 0.03 OrthoFinder output from all 47 species
Lfl_g06681 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.03 OrthoFinder output from all 47 species
MA_10206082g0010 PMH2, ATRH53 RNA helicase (PMH) 0.03 OrthoFinder output from all 47 species
Msp_g10755 PRH75 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22012 emb1138 sRNA cargo-loading helicase *(RH11/37) of extracellular... 0.03 OrthoFinder output from all 47 species
Nbi_g28749 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.05 OrthoFinder output from all 47 species
Sam_g06711 No alias group-II intron splicing RNA helicase *(RH3) & original... 0.04 OrthoFinder output from all 47 species
Sam_g26329 No alias group-II intron splicing RNA helicase *(RH3) & original... 0.03 OrthoFinder output from all 47 species
Smo10677 emb1138 RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
Smo150370 PRH75 DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Smo99603 emb1138 DEAD-box ATP-dependent RNA helicase 3, chloroplastic... 0.04 OrthoFinder output from all 47 species
Spa_g25942 PRH75 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08271 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.03 OrthoFinder output from all 47 species
Tin_g39635 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e003219_P001 PMH2, ATRH53,... RNA helicase (PMH) 0.04 OrthoFinder output from all 47 species
Zm00001e011716_P001 emb1138, Zm00001e011716 RH3 plastidial RNA basal splicing factor 0.03 OrthoFinder output from all 47 species
Zm00001e018107_P001 PMH2, ATRH53,... RNA helicase (PMH) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004055 argininosuccinate synthase activity IEP HCCA
MF GO:0004819 glutamine-tRNA ligase activity IEP HCCA
BP GO:0006425 glutaminyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR012562 GUCT 535 632
IPR011545 DEAD/DEAH_box_helicase_dom 185 355
No external refs found!