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  5. Ehy_g05498

Ehy_g05498 (VPS20.2)


Aliases : VPS20.2

Description : component *(VPS20) of ESCRT-III complex & original description: none


Gene families : OG0004858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004858_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g05498
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Dac_g00716 VPS20.2 component *(VPS20) of ESCRT-III complex & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01029745001 VPS20.1 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder output from all 47 species
Zm00001e015016_P002 VPS20.2, Zm00001e015016 component VPS20 of ESCRT-III complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 18 176
No external refs found!