1. Home
  2. Species
  3. Azolla filiculoides
  4. Sequence
  5. Azfi_s2240.g109970

Azfi_s2240.g109970


Description : ribosome docking factor *(MDM38) & original description: CDS=1-1584


Gene families : OG0002125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s2240.g109970

Target Alias Description ECC score Gene Family Method Actions
AT1G65540 No alias LETM1-like protein 0.03 OrthoFinder output from all 47 species
Dde_g05427 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25850 No alias ribosome docking factor *(MDM38) & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g39550.1 LOC_Os02g39550 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g13565 No alias ribosome docking factor *(MDM38) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g28747 No alias ribosome docking factor *(MDM38) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043022 ribosome binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004451 isocitrate lyase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0016833 oxo-acid-lyase activity IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR033122 LETM1-like_RBD 321 425
No external refs found!