Azfi_s2186.g109823

Description : not classified & original description: CDS=5-496

Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s2186.g109823
Cluster	HCCA: Cluster_95

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00218870	ANR1, AGL44,...	RNA biosynthesis.transcriptional activation.MADS box...	0.04	OrthoFinder output from all 47 species
AMTR_s00001p00267050	AGL6,...	RNA biosynthesis.transcriptional activation.MADS box...	0.04	OrthoFinder output from all 47 species
AMTR_s00001p00270400	AGL32, TT16,...	RNA biosynthesis.transcriptional activation.MADS box...	0.03	OrthoFinder output from all 47 species
AMTR_s00025p00244880	AGL61, DIA,...	RNA biosynthesis.transcriptional activation.MADS box...	0.02	OrthoFinder output from all 47 species
AMTR_s00071p00193200	STK, AGL11,...	RNA biosynthesis.transcriptional activation.MADS box...	0.03	OrthoFinder output from all 47 species
AMTR_s00071p00198970	XAL1, AGL12,...	RNA biosynthesis.transcriptional activation.MADS box...	0.02	OrthoFinder output from all 47 species
AT1G77950	AGL67	AGAMOUS-like 67	0.02	OrthoFinder output from all 47 species
AT2G42830	SHP2, AGL5	K-box region and MADS-box transcription factor family protein	0.03	OrthoFinder output from all 47 species
AT5G20240	PI	K-box region and MADS-box transcription factor family protein	0.03	OrthoFinder output from all 47 species
AT5G60910	AGL8, FUL	AGAMOUS-like 8	0.06	OrthoFinder output from all 47 species
Adi_g082624	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g38807	AGL91	MADS/AGL-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g19952	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g33356	AGL16	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g33966	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene13944.t1	AGL18, Aspi01Gene13944	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene15807.t1	AGL6, Aspi01Gene15807	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene15810.t1	STK, AGL11,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene15814.t1	SHP2, AGL5,...	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene17593.t1	AGL104, Aspi01Gene17593	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene17826.t1	SHP2, AGL5,...	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene19457.t1	AGL16, Aspi01Gene19457	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene49765.t1	Aspi01Gene49765	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene53310.t1	AGL16, Aspi01Gene53310	MADS/AGL-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene54037.t1	Aspi01Gene54037	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0001.g000595	No alias	MADS/AGL-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Azfi_s0009.g011751	No alias	MADS/AGL-type transcription factor & original...	0.06	OrthoFinder output from all 47 species
Ceric.29G021900.1	AGL16, Ceric.29G021900	MADS/AGL-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Dde_g09338	AGL14	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g31168	AGL13	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g51026	AGL42	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01012249001	AGL2, SEP1	RNA biosynthesis.transcriptional activation.MADS box...	0.06	OrthoFinder output from all 47 species
GSVIVT01019883001	GL19, AGL19	RNA biosynthesis.transcriptional activation.MADS box...	0.03	OrthoFinder output from all 47 species
GSVIVT01021534001	AGL62	RNA biosynthesis.transcriptional activation.MADS box...	0.03	OrthoFinder output from all 47 species
Gb_03068	AGL16	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
LOC_Os01g10504.1	SHP2, AGL5,...	transcription factor (MADS/AGL)	0.05	OrthoFinder output from all 47 species
LOC_Os04g49150.1	AGL6, LOC_Os04g49150	transcription factor (MADS/AGL)	0.04	OrthoFinder output from all 47 species
LOC_Os09g32948.1	AGL9, SEP3,...	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
LOC_Os12g21850.1	AGL61, DIA,...	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Len_g48343	AGL16	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Len_g52703	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
MA_19387g0010	AGL9, SEP3	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
MA_2986g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_412147g0010	SOC1, AGL20, ATSOC1	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_78010g0010	SHP2, AGL5	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
MA_94049g0010	AGL9, SEP3	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Msp_g08764	AGL21	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g09451	AGL21	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g31321	AGL16	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g17285	AGL16	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g46921	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g46922	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g60165	STK, AGL11	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g22352	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021995	SVP, AGL22	MADS/AGL-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Sam_g18903	No alias	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g27238	No alias	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g093960.3.1	AGL6, Solyc01g093960	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Solyc02g071730.4.1	SHP2, AGL5,...	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
Solyc02g091550.2.1	AGL21, Solyc02g091550	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Solyc05g012020.4.1	AGL2, SEP1,...	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Solyc10g080030.2.1	AGL18, Solyc10g080030	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Spa_g14680	AGL16	MADS/AGL-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g29118	AGL21	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g23260	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001810	F-box_dom	15	51
IPR002487	TF_Kbox	21	81

External Links

No external refs found!

Azfi_s2186.g109823

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation