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  5. Azfi_s2045.g108868

Azfi_s2045.g108868


Description : component *(ECHIDNA) of trans-Golgi-network (TGN) trafficking complex & original description: CDS=176-808


Gene families : OG0003195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s2045.g108868
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Pir_g31820 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.02 OrthoFinder output from all 47 species
Sam_g09179 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR008564 TVP23-like 9 115
No external refs found!