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  5. Azfi_s1821.g107218

Azfi_s1821.g107218 (AGAL1, AtAGAL1)


Aliases : AGAL1, AtAGAL1

Description : EC_3.2 glycosylase & original description: CDS=399-923


Gene families : OG0000574 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000574_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s1821.g107218
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00171p00051180 AGAL2, AtAGAL2,... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.04 OrthoFinder output from all 47 species
Aev_g20448 AGAL2, AtAGAL2 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07750.t1 AGAL2, AtAGAL2,... EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10399 AGAL2, AtAGAL2 EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g12383 AGAL2, AtAGAL2 alpha-galactosidase *(AGAL) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30802 AGAL1, AtAGAL1 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_21989 AGAL2, AtAGAL2 Alpha-galactosidase OS=Coffea arabica... 0.03 OrthoFinder output from all 47 species
Gb_38041 AGAL2, AtAGAL2 Alpha-galactosidase 2 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
LOC_Os10g35110.2 AGAL2, AtAGAL2,... Alpha-galactosidase OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
MA_41308g0010 AGAL2, AtAGAL2 Alpha-galactosidase OS=Coffea arabica... 0.03 OrthoFinder output from all 47 species
MA_54403g0020 AGAL2, AtAGAL2 Alpha-galactosidase 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g16191 AGAL1, AtAGAL1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g42241 AGAL1, AtAGAL1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63886 AGAL2, AtAGAL2 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g04423 No alias alpha-galactosidase *(AGAL) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g18970 AGAL2, AtAGAL2 EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g29019 AGAL2, AtAGAL2 alpha-galactosidase *(AGAL) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002241 Glyco_hydro_27 1 124
No external refs found!