Azfi_s1463.g103412 (AT-RSH2, ATRSH2, RSH2)


Aliases : AT-RSH2, ATRSH2, RSH2

Description : bifunctional ppGpp synthetase and hydrolase *(RSH) & original description: CDS=264-1667


Gene families : OG0001778 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001778_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s1463.g103412
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00240620 AT-RSH2, ATRSH2,... Probable GTP diphosphokinase RSH2, chloroplastic... 0.03 OrthoFinder output from all 47 species
Adi_g106566 AT-RSH2, ATRSH2, RSH2 bifunctional ppGpp synthetase and hydrolase *(RSH) &... 0.03 OrthoFinder output from all 47 species
Ala_g03720 RSH3, AT-RSH3, ATRSH3 bifunctional ppGpp synthetase and hydrolase *(RSH) &... 0.04 OrthoFinder output from all 47 species
Azfi_s0104.g044819 RSH3, AT-RSH3, ATRSH3 bifunctional ppGpp synthetase and hydrolase *(RSH) &... 0.04 OrthoFinder output from all 47 species
Ceric.12G079500.1 AT-RSH2, ATRSH2,... bifunctional ppGpp synthetase and hydrolase *(RSH) &... 0.03 OrthoFinder output from all 47 species
Ceric.19G001700.1 AT-RSH2, ATRSH2,... bifunctional ppGpp synthetase and hydrolase *(RSH) &... 0.03 OrthoFinder output from all 47 species
Dac_g20861 RSH3, AT-RSH3, ATRSH3 bifunctional ppGpp synthetase and hydrolase *(RSH) &... 0.04 OrthoFinder output from all 47 species
Ehy_g06085 AT-RSH2, ATRSH2, RSH2 bifunctional ppGpp synthetase and hydrolase *(RSH) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01016749001 RSH3, AT-RSH3, ATRSH3 Probable GTP diphosphokinase RSH3, chloroplastic... 0.04 OrthoFinder output from all 47 species
Len_g13746 AT-RSH2, ATRSH2, RSH2 bifunctional ppGpp synthetase and hydrolase *(RSH) &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0385.g027331 AT-RSH2, ATRSH2, RSH2 bifunctional ppGpp synthetase and hydrolase *(RSH) &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015969 guanosine tetraphosphate metabolic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR007685 RelA_SpoT 208 318
No external refs found!