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  5. Azfi_s1429.g102968

Azfi_s1429.g102968 (RPK1)


Aliases : RPK1

Description : not classified & original description: CDS=1-2502


Gene families : OG0002940 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002940_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s1429.g102968
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Ala_g27787 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 20 74
IPR001611 Leu-rich_rpt 124 139
IPR001611 Leu-rich_rpt 452 474
IPR001611 Leu-rich_rpt 670 710
IPR001611 Leu-rich_rpt 380 439
No external refs found!