Heatmap: Cluster_79 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Vegetative Sporophyte
Adult Sporophyte
Leaf (0 mg/L NH4NO3)
Leaf (30 mg/L NH4NO3)
Leaf (90 mg/L NH4NO3)
Sporophyte; w/o NH4NO3, w/o cyanobacteria
Sporophyte; w/o NH4NO3, w cyanobacteria
Sporophyte; w NH4NO3, w cyanobacteria
Sporophyte; w NH4NO3, w/o cyanobacteria
Root Tip, D-3 6h mock treated
Root Tip, D-3 6h 0.1 uM IAA treated
Root Tip, D-3 6h 0.5 uM trans-zeatin treated
Microsporocarp
0.12 1.8 -0.79 -3.16 -1.63 1.34 0.82 0.39 0.7 -9.51 -8.63 -8.6 -2.6
0.11 2.21 -2.01 -5.31 -3.61 1.16 0.54 0.51 0.66 - - - -1.95
-0.03 2.15 -1.63 -2.07 -1.25 0.4 0.04 -0.03 -0.14 -1.04 -1.45 -1.11 0.08
0.16 2.62 -0.61 -4.2 -2.49 0.59 -0.15 -0.12 0.01 -10.65 -9.42 -11.19 -0.9
-0.75 2.34 -1.45 -3.81 -2.57 1.34 0.33 -0.55 -0.18 - - - 0.44
-0.13 1.7 -0.24 -1.5 -0.07 1.09 -0.58 -2.88 -2.31 0.07 0.05 -0.13 -0.83
-0.04 1.96 -2.55 -2.95 -2.7 0.51 0.1 0.07 0.13 -0.42 -0.43 -0.5 -0.24
-0.15 1.35 -0.42 -0.65 -0.12 0.43 0.22 0.09 0.61 -0.83 -0.83 -0.75 -1.25
0.21 1.82 -1.6 -2.73 -2.01 0.59 0.35 0.33 0.52 -0.99 -1.0 -0.9 -0.82
-0.91 1.76 -1.01 -1.09 -0.27 0.05 -0.49 -0.53 -0.2 0.03 -0.37 -0.03 0.28
-0.39 1.9 -1.12 -1.36 -1.01 1.09 -0.21 -1.66 -1.16 -0.21 -0.08 -0.28 -0.38
-0.25 2.09 -2.43 -2.51 -2.02 0.81 0.6 1.03 0.71 -3.78 -4.28 -4.24 -2.51
-1.4 2.25 -0.69 -0.18 -0.69 0.45 -0.38 -1.07 -0.63 -1.09 -1.64 -1.35 0.37
-0.84 2.07 -2.05 -6.41 -2.79 1.31 0.86 0.72 0.72 -5.08 -4.44 -4.17 -2.98
-0.44 1.95 -0.57 -0.05 0.62 0.66 -0.15 -0.69 0.13 -1.77 -2.56 -2.4 -1.43
-1.24 2.47 -2.17 -2.65 -2.35 0.29 0.14 -0.06 0.89 -1.89 -1.96 -1.51 -1.17
-0.18 2.3 -1.69 -2.11 -1.79 1.03 0.79 0.39 0.18 -8.69 -9.1 -9.86 -3.04
-0.33 2.32 -0.99 -1.02 -1.5 -0.22 -0.3 -0.46 0.77 -1.26 -1.33 -1.39 -0.82
-0.49 2.0 -1.44 -1.47 -0.95 -0.04 0.18 0.45 -0.08 -0.54 -0.5 -0.29 -1.24
-0.08 1.77 -1.95 -1.05 -1.31 1.16 0.6 0.67 0.56 -4.79 -4.97 -4.7 -0.79
-0.18 1.71 -3.04 -3.41 -3.51 1.11 0.97 0.78 0.76 -2.39 -2.57 -2.84 -1.0
-0.33 2.41 - - - 0.35 0.06 -1.29 0.15 -0.24 0.2 -0.08 -3.16
-1.51 2.74 - - - -0.18 -0.43 -0.17 -0.1 -2.14 -2.03 -1.88 0.83
-0.3 2.17 -1.87 -3.55 -6.74 0.84 0.8 0.66 0.66 -2.57 -3.03 -2.71 -2.45
-1.44 3.12 -5.57 - -5.45 -0.91 -1.17 -1.79 -1.24 -0.7 -1.22 -1.34 -0.41
-0.02 1.57 -1.08 -1.06 -0.85 0.85 0.41 0.13 0.77 -1.74 -1.87 -1.69 -0.43
-0.79 1.72 -1.96 -1.42 -1.04 0.22 0.41 0.5 0.54 -0.38 -0.2 -0.19 -2.81
-0.37 1.47 -0.91 -1.49 -0.61 0.69 0.18 -0.07 0.09 -0.08 -0.37 -0.12 -0.95
-0.04 1.96 -0.35 0.11 -0.16 0.38 -0.06 0.01 -0.45 -1.72 -1.42 -1.73 -1.32
-0.2 1.85 -0.75 -1.59 -0.76 0.44 0.13 -0.02 -0.13 -0.2 -0.28 -0.44 -2.12
-0.34 2.02 -1.32 -1.17 -1.24 0.33 0.23 0.23 0.4 -1.75 -1.58 -1.76 0.07
-0.34 2.61 -1.31 -2.54 -1.13 1.89 0.18 -3.95 -3.24 -4.56 -6.3 -5.54 -
-0.36 2.07 - - - 0.4 0.96 0.45 0.67 -1.44 -1.03 -2.42 -0.37
-0.99 2.25 -1.09 -2.01 -1.0 1.03 0.13 -0.34 0.21 -1.49 -1.98 -1.67 -0.96
-0.54 1.86 -3.98 -3.71 -5.57 0.94 1.1 0.57 1.12 -3.01 -2.56 -2.44 -1.64
-0.16 2.54 -1.04 -1.71 -1.05 0.55 -0.18 -0.51 -0.32 -3.14 -3.2 -3.38 -0.26
-0.1 2.32 -1.69 -3.14 -1.23 0.38 0.76 0.5 0.41 -2.7 -3.51 -2.46 -4.42
-0.21 1.4 -1.43 -1.18 -1.08 0.7 0.33 -0.01 0.45 -0.7 -0.67 -0.43 -0.02
0.0 1.96 -0.72 -1.3 -0.62 0.84 0.01 -0.69 -0.34 -0.89 -0.91 -0.94 -0.65
-0.56 2.05 -0.56 -0.86 -0.5 0.52 0.08 -0.01 0.5 -1.41 -1.43 -1.34 -2.29
-0.05 2.24 -0.69 -1.02 -0.8 -0.56 0.41 1.0 -0.32 -2.19 -2.27 -2.19 -2.52
-0.09 1.52 -0.32 -0.67 -0.16 0.13 0.21 0.33 0.36 -0.8 -0.94 -0.72 -1.45
0.03 1.19 -0.14 -0.68 -0.37 -0.27 -0.56 -0.61 -0.14 0.1 0.27 0.27 -0.22
-0.6 1.92 -0.66 -0.8 -1.02 -0.18 0.07 0.05 0.55 -0.11 -0.68 -0.64 -2.06
-0.18 2.19 -1.52 -2.87 -2.36 0.25 0.55 0.43 0.1 -0.56 -1.21 -0.84 -2.95
-0.2 1.85 -0.83 -0.97 -0.54 0.88 0.05 -0.57 -0.41 -0.68 -0.56 -0.56 -1.04
0.36 2.28 -0.75 -0.72 -2.21 1.47 0.03 -0.99 -0.22 -17.01 -7.18 -8.12 -1.86
-0.73 1.43 -0.68 -0.95 -0.41 0.72 0.35 0.2 0.56 -0.83 -0.72 -0.69 -1.14
-0.2 1.24 -0.39 -1.08 -0.46 -0.0 -0.37 -0.53 -0.26 0.47 0.28 0.35 -0.64
-0.23 2.31 -1.81 -3.68 -3.22 -0.06 0.8 1.03 0.89 -6.93 -6.78 -7.4 -3.68
-0.86 1.93 -3.22 -2.86 -2.81 1.14 0.69 0.47 1.33 -3.91 -5.12 -4.81 -1.33
-0.79 1.37 -0.7 -1.16 -0.31 0.76 0.34 0.15 0.48 -0.47 -0.33 -0.47 -1.93
-0.84 2.3 -2.45 -3.15 -2.55 1.14 0.79 0.59 0.51 -8.09 -7.29 -8.06 -2.52
-0.81 1.45 -0.42 -0.21 0.33 0.15 0.06 -0.02 0.35 -0.58 -0.56 -0.68 -1.19
0.11 2.69 -1.12 -0.63 -1.04 -0.52 -0.04 0.09 -0.71 -2.72 -2.6 -2.85 -3.66
-0.27 1.91 -0.71 -1.69 -0.63 0.37 0.07 -0.84 0.47 -0.74 -1.09 -0.44 -0.41
-0.39 2.73 -1.65 -3.16 -1.8 0.76 0.13 -0.23 0.08 -3.48 -3.29 -5.59 -
-0.78 2.41 -1.89 -3.17 -2.81 1.44 0.36 -0.46 0.81 -6.3 -5.17 -7.34 -4.47
-0.96 2.05 -0.61 -1.19 -0.74 0.57 0.15 -0.45 0.91 -1.33 -1.07 -1.33 -2.57
-0.67 1.84 -0.87 -1.41 -0.61 -0.13 -0.52 -0.76 -0.08 -0.38 -0.29 -0.26 0.73
-0.29 2.17 -1.32 -1.14 -1.12 0.86 0.36 0.25 0.26 -2.36 -2.56 -2.4 -1.57
-0.16 1.93 -2.25 -0.97 -0.69 1.03 0.55 -0.04 0.86 -2.3 -3.18 -2.36 -2.85
-0.55 1.64 -0.47 -0.91 -0.79 0.27 0.42 0.25 0.42 -0.65 -0.67 -0.64 -1.33
-0.24 1.86 -1.27 -1.81 -1.07 0.24 0.21 -0.13 0.85 -1.24 -1.07 -1.18 -0.07
-0.39 2.33 -2.75 -2.4 -2.6 0.76 -0.09 -0.75 0.33 -2.09 -1.51 -1.62 0.4
0.06 1.98 -1.16 -1.71 -0.78 0.47 -0.25 -0.53 -0.34 -0.22 -0.28 -0.26 -1.15
0.12 3.19 -4.62 -4.84 -5.02 -0.57 -0.6 -0.82 -0.72 -7.27 -7.24 -8.15 -2.69
-0.88 2.09 -1.7 -1.85 -1.53 1.15 0.83 0.69 0.48 -3.39 -3.65 -3.69 -6.59
-0.35 2.53 -1.86 -0.33 -0.64 0.1 0.01 0.45 -0.14 - - - -1.35
-2.42 2.2 -1.76 -4.23 -2.38 1.6 1.19 0.59 -0.34 -4.87 -4.11 - -
-0.56 2.38 -2.98 -2.35 -2.69 1.43 0.51 -2.2 1.01 -5.88 -6.82 -5.85 -1.88
-0.87 2.19 -4.31 -4.45 -4.43 1.04 0.5 0.41 0.59 -1.58 -1.5 -1.95 -1.03

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.